
AlignmentEditor_Seaview |
org.cipres.kepler.AlignmentEditor_Seaview |
Given an alignment, the AlignmentEditor_Seaview actor displays the alignment
in the seaview window and facititates the user to edit the alignment.
Note1: since Seaview is an application running as another process with GUI,
the actor cannot monitor the execution of Seaview. Thus the actor cannot know
when the user finishes the work and closes the Seaview window.
Note2: Here we assume the user will save the output file with the same name
as the input file. We will change it to let the user input the output file
name in the future.
Author(s): Zhijie Guan, Alex Borchers
Version:$Id: AlignmentEditor_Seaview.java,v 1.1 2006/05/19 11:51:23 guan Exp $
inputFileName
The input file name is transferred into the actor through this port.
The input file contains the alignment for reviewing and editing.
outputFileName
The output file name is sent out throught this port.
The output file contains the edited alignment.